2006 NCAA Football Championship
Updated February 21, 2017 | Factmonster Staff 
DIVISION I-AA
| Quarterfinals | (Dec. 2, 2006) |
| Massachusetts 24, New Hampshire 17 | |
| Appalachian State 38, Montana State 17 | |
| Youngstown State 28, Illinois State 21 | |
| Montana 20, Southern Illinois 3 | |
| Semifinals | (Dec. 8–9, 2006) |
| Massachusetts 19, Montana 17 | |
| Appalachian State 49, Youngstown State 24 | |
| Championship | (Dec. 15, 2006) |
| Appalachian State 28, Massachusetts 17 |
DIVISION II
| Quarterfinals | (Dec. 2, 2006) |
| Northwest Missouri State 28, Chadron State 21 | |
| Bloomsburg University 24, Shepherd University 21 | |
| Grand Valley State 30, North Dakota 20 | |
| Delta State 27, North Alabama 10 | |
| Semifinals | (Dec. 10, 2006) |
| Grand Valley State 49, Delta State 30 | |
| Northwest Missouri State 33, Bloomsburg University 3 | |
| Championship | (Dec. 16, 2006) |
| Grand Valley State 17, Northwest Missouri State 14 |
DIVISION III
| Quarterfinals | (Dec. 2, 2006) |
| Wisconsin-Whitewater 17, St. John's (Minn.) 14 | |
| Wesley 34, Mary Hardin-Baylor 20 | |
| St. John Fisher 31, Rowan University | |
| Mount Union 17, Capital 14 | |
| Semifinals | (Dec. 9, 2006) |
| Mount Union 26, St. John Fisher 14 | |
| Wisconsin-Whitewater 44, Wesley College 7 | |
| Championship | (Dec. 16, 2006) |
| Mount Union 35, Wisconsin-Whitewater 16 |
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